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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Home BLAST Prediction RegMap ATRM Download Help About Links |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.065GY | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 479aa MW: 53683.4 Da PI: 7.2761 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.7 | 0.00048 | 374 | 406 | 18 | 55 |
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L +A+ YIk Lq Aradu.065GY 374 DKITALQQIVSPF-----GKTDTASVLFEAIGYIKFLQ 406 7888889988887.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.343 | 356 | 405 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.7E-8 | 371 | 413 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.96E-9 | 371 | 421 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.36E-4 | 374 | 410 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 479 aa Download sequence Send to blast |
MWWKLSCNHF SYFIQLVDIS VSTSFTNASN HSTLTVDSSR RLLDPSSNNN HFLPEHADDN 60 HLWNHVLSAV GSNGELQNNE EMGEMKFLDA LSSKNMTSSM FEEPACDYLK KLDTTTSWEY 120 SGGSTSSSFN NSFEKHLNNN NNNNNGFSDD ALIENNERLT KLSNLVSTWS IAPPDPEVSS 180 SHFDHPPTNI NNHHHHDPNC NFKQQVFIGD STSYPPISSY DHPTKVKEEF HHHHQTNSGF 240 QNGLINGLSS VMGGGDSSGN KFYHDLPNLS SCTRNISDVI SFNSRLGRPV LGIHAQKPNI 300 KYINNLSESK KHQGLQTTSP INRSNNGRIE GTTAREVKKK RSEESSEAIL KKPKQDTSTA 360 SSTKVQAPKV KLGDKITALQ QIVSPFGKTD TASVLFEAIG YIKFLQEQVQ LLSNPYLKSN 420 SHKDPWGSLD RKDHHKEDAK LDLRTRGLCL VPTSCTPLIY RENSGPDYWT PAYRGCLYR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015942765.1 | 0.0 | PREDICTED: transcription factor bHLH111 | ||||
TrEMBL | A0A0L9TYW0 | 0.0 | A0A0L9TYW0_PHAAN; Uncharacterized protein | ||||
TrEMBL | A0A0S3SNW3 | 0.0 | A0A0S3SNW3_PHAAN; Uncharacterized protein | ||||
STRING | GLYMA20G32520.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10116 | 26 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31050.1 | 2e-54 | bHLH family protein |